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VirtualTrialHarness: Coordinating Agentic Operationalization of Virtual Trial Protocols Across Complex Clinical Schemas

arXiv:2611.05551v1 Announce Type: new Abstract: Virtual trials use routinely collected clinical data to evaluate treatment strategies, but translating a study protocol into an executable analysis requires determining how clinical concepts and study requirements should be represented in the available data and applied consistently across the workflow. These decisions depend on local data representations and operational conventions and can involve source selection, patient and encounter identity, linkage, and temporal interpretation. Here we introduce VirtualTrialHarness (VTHarness), an agent framework that coordinates virtual-trial operationalization by selecting reusable procedural skills for each workflow stage and uses explicit contracts to maintain consistent study decisions across stages. We also introduce VTBenchmark for evaluating source selection and cohort construction. Across three complex synthetic environments, VTHarness successfully produced all required cohort outputs matching the references in 95.1% of workflows after requirement clarification, compared with 60.4% using retrieval from the same procedural corpus. Procedural skills improved source recovery across three language models and increased source overlap with analyst code in 13 Mayo Clinic cases. Site-specific adaptation enabled reference-matched cohort execution across eight MIMIC-IV tasks. Within the Mayo Clinic Virtual Trials Program, the framework supported investigator review of cohort construction and endpoint analysis. These findings support coordinating procedural guidance with workflow decisions to improve virtual-trial implementation across complex clinical schemas.

Workflow SDK adds idempotent starts

The Workflow SDK's start() function now allows initiating a workflow run and claiming a hook atomically, eliminating the race condition present in the previous getHookByToken()-then-start() pattern. This change ensures idempotency using a token derived from domain-specific identifiers like order or invoice IDs. Duplicate starts fail safely with a HookConflictError, which includes the conflicting run's ID. The claimed hook is available immediately, enabling early payload buffering and ordered delivery even before execution begins. Inside workflows, createHook with the same token binds to the existing hook without conflict or additional steps. Experimental settings like minRetention prevent late duplicates by keeping tokens reserved after run completion.

A thousand fewer paths to root

OpenAI built an autonomous pipeline that found, validated, and generated patches for 948 local privilege-escalation vulnerabilities in the Linux kernel.

b12098

The llama.cpp release b12098 includes accurate support for Qwen3-VL video prompt format and provides precompiled binaries for multiple platforms including macOS, Linux, Windows, Android, and openEuler, with various backend options such as CUDA, Vulkan, ROCm, OpenVINO, SYCL, and Snapdragon-specific optimizations. The release also features a standalone UI package and detailed setup guides for specific hardware configurations.

b12109

The llama.cpp release b12109 is now available, offering pre-compiled binaries for macOS, Linux, Windows, Android, and openEuler across various architectures and backends including CPU, CUDA, Vulkan, ROCm, OpenVINO, SYCL, and specialized hardware like Snapdragon. The release includes support for Apple Silicon and Intel macOS, multiple Linux distributions, and detailed setup guides for specific platforms.

b12110

The llama.cpp project has been updated to version 0.9.0, with new releases available for multiple platforms including macOS, Linux, Windows, Android, and iOS. The update includes support for various backends such as CUDA, Vulkan, ROCm, OpenVINO, SYCL, and Snapdragon-specific hardware. Some builds are marked as disabled or experimental, and detailed setup guides are provided for specific configurations.

CaRe-KT: Continuity-Aware Retrieval-Augmented Reasoning for Knowledge Tracing

arXiv:2611.03744v1 Announce Type: new Abstract: Knowledge tracing (KT) estimates learners' evolving knowledge states from interaction histories to support adaptive learning. Retrieval-augmented KT improves these estimates using cross-learner behavioral evidence, but existing approaches typically separate evidence retrieval from downstream prediction. This creates a retrieval-inference alignment gap because evidence relevance varies with the learner's evolving state and prediction context. We propose CaRe-KT, a query-adaptive framework that maintains relevance continuity between evidence acquisition and inference without equating retrieval relevance with predictive utility. CaRe-KT introduces an Evidence-Graph Cache (EGC) that combines persistent question-level relational compatibility with interaction-level temporal validity to construct query-specific evidence subgraphs. Historical learning trajectories retrieved through these subgraphs are encoded alongside the target learner's history in a shared representation space using outcome-supervised contrastive learning. An attention mechanism combines acquisition relevance with learned query-evidence compatibility, allowing relevance to inform, rather than determine, each trajectory's predictive influence. Experiments across five benchmarks show that CaRe-KT outperforms strong KT baselines and remains robust under sparse-history and cold-start conditions. These findings support relevance continuity as a design principle for retrieval-augmented knowledge tracing.

Co-Occurrence Priors Override Visual Spatial Evidence: Understanding False Alarms in Vision-Language Models for Construction Struck-By Hazard Detection

arXiv:2611.04112v1 Announce Type: new Abstract: Vision-language models (VLMs) increasingly support construction hazard monitoring, yet their frequent false alarms remain poorly understood. This study investigates whether false struck-by hazard warnings arise from failures in object recognition, spatial relation encoding, or hazard decisions dominated by learned co-occurrence priors. We evaluated Qwen2.5-VL-7B and InternVL3.5-8B using 355 counterfactual worker-excavator scene pairs with controlled spatial proximity and worker-removal variants, combining behavioral analysis, internal representation probing, causal interventions, and decision correction. Both models recognized the entities and encoded their spatial relations (out-of-fold AUROC: 0.82 and 0.91), assigning higher hazard scores to near than far scenes in 79% and 73% of pairs. Nevertheless, 74% and 100% of far scenes were falsely classified as hazardous. Removing the worker reduced Qwen's hazard rate to 11%, while worker presence exerted 2.4- and 3.2-times greater influence on hazard scores than spatial proximity in the respective models. Attention-head interventions, neuron-level interventions, and activation steering failed to eliminate this co-occurrence bias. However, conditioning hazard decisions on the model's own spatial-relation representation improved Qwen's specificity from 0.36 to 0.58 at matched sensitivity, outperforming threshold recalibration. These findings reveal that VLM struck-by false alarms stem primarily from decision-making failures rather than deficiencies in object recognition or spatial encoding, suggesting that future efforts should prioritize conditioning hazard decisions on encoded spatial evidence rather than further improving visual recognition alone.

Do Pretrained Backbones Transfer to Physical Sensors? A Systematic Study of Multimodal Initialization Across the Sensor Stack

arXiv:2611.04034v1 Announce Type: new Abstract: Transfer learning from pretrained backbones has become standard practice in multi-sensor computer vision---yet two questions remain open: which pretrained weights transfer best to multi-sensor setups, and can in-domain pretraining outperform off-the-shelf solutions? Frameworks like MultiMAE demonstrate the utility of masked autoencoding in a multi-modal context, but rely entirely on dense, model-derived modalities. It is unclear how robustly these methods translate to real-world applications that use physical sensors, where the aggregation of diverse public datasets for large-scale pretraining inherently introduces modality sparsity. To investigate this systematically, we curate a multi-sensor autonomous driving collection of $2.82M$ images from 16 publicly available datasets, incorporating both physical hardware modalities (RGB, LWIR, NIR, Event) and model-derived modalities (Stereo Depth, Segmentation). We use this collection for in-domain pretraining based on the MultiMAE approach. We adapt MultiMAE's loss formulation to accommodate sparse samples, and study the effect of an enforced encoder bottleneck for modality alignment and of additional losses specific to dense reconstruction (SSIM and FFT). We then systematically compare against common pretrained backbones (ViT, MAE, DINO and MultiMAE) across downstream sensor fusion tasks. We find that MultiMAE is a surprisingly strong out-of-the-box baseline, transferring effectively even to modalities it has never seen, while our targeted modifications yield incremental but consistent improvements on multi-sensor transfer and overall robustness.

Do We Still Need Rotation-Invariant Architectures? A Statistical Robustness Benchmark for Point Cloud Classification

arXiv:2611.03952v1 Announce Type: new Abstract: A substantial line of work builds rotation invariance directly into point cloud architectures. We benchmark 10 architectures (PointNet, PointNet++, DGCNN, RIConv, RIConv++, RISurConv, PointMLP, PointTransformer, and the equivariant VN-PointNet and VN-DGCNN) across 5 domains under pose, noise, and occlusion, and analyze the results with confirmatory hypothesis tests rather than point estimates. The three rotation-invariant (RI) architectures achieve the best pose robustness but rank among the lowest on noise robustness in 4 of 5 domains. We ask whether this cost is intrinsic to invariance or specific to how invariance is obtained. We retrain all 10 architectures unchanged, with a simple invariance loss on the embedding and three training seeds each, and evaluate all models on the independently designed ModelNet40-C. Invariance training transfers narrowly but reliably. It improves exactly the corruption families its perturbations target wherever the baseline has headroom (mean occlusion +10.5, lidar +13.4 percentage points of accuracy). At matched training budget the best standard backbone and the best RI architecture end on par on unseen corruptions (within 2.5 percentage points in every seed), and invariance-trained RIConv++ is the most seed-stable top model. Once rotation augmentation is widened, standard backbones concede only a flat, angle-independent accuracy offset under full-sphere rotation. We release the benchmark along with a package for analyzing point cloud robustness and reproducing our results.

Introducing Images 2.6

Images 2.6 brings faster image generation, GIF creation, more precise editing, and new API controls across ChatGPT, Codex, and the API.

LOLPlay: Benchmarking Real-Time Visual Agents in League of Legends

arXiv:2611.03685v1 Announce Type: new Abstract: Visual agents need to coordinate reasoning and action while their environment evolves during inference. We introduce LOLPlay, a benchmark in native \emph{League of Legends} with 36 champion-specific tasks spanning resource management, combat, cooperation, and objectives. Agents interact through screenshots and mouse--keyboard actions; automated initialization and 82 executable subgoal checks distinguish partial progress from completion. Across 324 task evaluations of three models at three reasoning-effort settings, GPT-6 Astra achieves the highest task success rate of 25.0\% at low and medium effort, and the highest subgoal success rate of 40.3\% at medium effort. However, high effort improves neither metric over low effort for any model. For Astra, longer requests leave fewer interaction rounds, suggesting a cost to additional reasoning in real-time control. Trajectories reveal incomplete subgoal composition and actions executing after the observed scene changes, motivating agents that combine visual reasoning with timely action.

MCPGuard: Finding Conformance Gaps in MCP SDKs via Dual-Track Analysis and Dynamic Adjudication

arXiv:2611.03662v1 Announce Type: new Abstract: The Model Context Protocol (MCP) connects large language model agents to external tools and services through official SDKs that implement message validation and session logic. Specification constraints omitted by these SDKs may propagate to downstream applications, highlighting the importance of SDK-level conformance testing. Yet existing MCP conformance tools mainly exercise running endpoints and reveal little about whether SDK models enforce specification requirements. We present MCPGuard, an automated LLM-based framework for detecting specification-to-SDK conformance gaps. Its structural track aligns JSON Schema constraints with normalized SDK models and produces constraint-specific evidence. Its behavioral track extracts normative prose rules, retrieves bounded function-level slices, and audits them with LLMs for candidate omissions. An evidence-aware dynamic adjudicator then inspects complete source context and builds PoCs to validate candidates. A shared kernel with language-specific adapters enables analysis across SDKs. On the official Python 1.26.0 and TypeScript 1.29.0 SDKs, MCPGuard confirms 13 and 19 findings, respectively, none of which are exposed by two black-box baselines. Tests on open MCP servers further show that these gaps can systematically propagate downstream. By making SDK conformance of specification constraints directly testable, MCPGuard complements conventional endpoint-oriented conformance suites.

Minimal Superior Penalties: Characterising and Calibrating Decision-Aware Proper Scoring Rules

arXiv:2611.03734v1 Announce Type: new Abstract: Training a classifier means letting a validation metric decide which model is kept and when training stops. A natural requirement on that metric is superiority: every correctly classified forecast should score better than every incorrectly classified one, however close the underlying probabilities are. Neither the Brier score nor the logarithmic score satisfies this on its own. We show that superiority is governed by the separation between two endpoints -- the supremum of the score on correct predictions and the infimum on incorrect predictions -- and derive both in closed form for each score. Their difference is the infimal penalty, the greatest lower bound on the penalty needed to restore superiority. Prior work restores superiority with a penalty calibrated from the first endpoint alone; for the Brier base, our infimal penalty is smaller than that published penalty by a factor ranging from 4.00 at three classes to 2.11 at twenty. We further embed the published and infimal penalties in a one-parameter family and show that, under a single-valued tie convention, every member of the family is strictly proper. In a pre-specified two-dataset case study, mean selected-model macro-F1 rises with the penalty in the reported ten-class regimes, though not distinguishably from noise once seed/selection-mode nesting is accounted for; a fifth regime at forty-seven classes does not reproduce even this descriptive pattern. The intended no-superiority baseline is algebraically a rescaling of the family under test, so the experiment cannot attribute the observed pattern specifically to superiority. When superiority itself is the objective, any penalty strictly above the infimal value suffices; choosing a larger penalty is a separate calibration trade-off rather than a requirement for the guarantee.

Rethinking Next-Visit Diagnosis Prediction Beyond Aggregate Metrics: Retrieval--Memory Multi-Agent Adjudication

arXiv:2611.03826v1 Announce Type: new Abstract: Next-visit diagnosis prediction forecasts the diagnoses documented at a patient's next encounter, turning retrospective electronic health records into prospective clinical prediction. However, conventional aggregate evaluation obscures its multifaceted nature: distributionally, models must handle variable-size diagnosis sets and long-tailed labels; temporally, they must distinguish persistent, newly recorded, and recurrent diagnoses; and both vary with observed history depth. We introduce an evaluation framework along these dimensions and apply it to rule-based heuristics, LLM-based prompting, retrieval, memory, and multi-agent approaches. This reveals that repeating the last visit outperforms most LLM-based approaches overall despite predicting no new or recurrent diagnoses, and that retrieval and memory exhibit distinct profiles whose relative strengths vary across temporal transitions and backbones. Motivated by this, we propose LONGINUS, a retrieval-memory multi-agent adjudication framework combining evidence retrieved from patient records with structured memory of the patient trajectory. Using cross-view agreement as a reliability heuristic, it preserves shared predictions and adjudicates disagreements without revealing their source. Across MIMIC-III and MIMIC-IV with four LLM backbones, LONGINUS achieves the best transition-specific performance among LLM-based methods in nearly all settings while remaining competitive with them on aggregate metrics.

ScienceVision: Can AI Observe and Reason Like a Scientist?

arXiv:2611.04087v1 Announce Type: new Abstract: Scientific discovery builds on accurate observations interpreted through domain knowledge and reasoning. For scientific 3D data, this requires understanding structures and spatial relationships, from protein contacts to anatomical organization. Existing multimodal benchmarks largely evaluate text and 2D images, while scientific 3D evaluations vary in representations and protocols across disciplines, limiting cross-disciplinary comparison. To assess these foundational capabilities, we introduce ScienceVision, a cross-domain benchmark for scientific 3D understanding and reasoning through expert-level visual question answering (VQA). We construct 250 questions, with 50 each from Biology, Chemistry, Medical Imaging, Mechanical CAD, and Architecture, through a pipeline combining synthetic question generation with domain-expert review and annotation. Each task pairs a native 3D artifact with a scientific question, a specified response format, and a task-specific reference answer, requiring domain knowledge to be applied to geometric or topological evidence. We evaluate 12 models on the same questions in three settings: visual question answering with native 3D artifacts accessed through an agent harness's file and code-execution tools; the same workflow augmented with expert-inspired viewer inspection and measurement tools exposed through the Model Context Protocol (MCP); and visual question answering from prescribed rendered 2D images using an agent harness. All settings use the same task-specific deterministic final-answer scoring. The inspection environment supports view changes, target isolation, and slice inspection. In this main comparison, the best mean answer score is 0.53 out of 1. Mean scores in the native-artifact workflow without additional MCP tools exceed those in the rendered-image workflow for every model, by 17.2 percentage points on average.

Show HN: Alternative to Nvidia Auto-Ontology

This repo provides an alternative to the ontology compiling capabilities of NVIDA Auto-Ontology.The main difference is that it builds the ontology from most of your existing data assets (transformation code, dashboards, docs), instead of building it from your warehouse and semantic layer only.It consists in skills and python scripts that ingest the metadata and docs your team already has, and compile them into YAML and Markdown files structured in a file tree that an agent can use as context to query your data.When your existing asset contradict, or reveal a gap in the business context around your data, it writes down questions for you and your team instead of guessing a plausible meaning.It runs locally in any coding agent. Comments URL: https://news.ycombinator.com/item?id=50363667 Points: 1 # Comments: 0

Towards Automatic Heart Murmur Characterization from Multi-spot Phonocardiograms

arXiv:2611.03654v1 Announce Type: new Abstract: Cardiac auscultation traditionally detects the presence of a heart murmur, but clinicians further characterize it by timing, shape, pitch, quality, and grade. Most automatic phonocardiogram analysis systems stop at binary detection and do not estimate this richer description. In this work, we formulate automatic murmur characterization as five patient-level classification tasks and compare three multi-spot strategies on recordings from the aortic, pulmonary, mitral, and tricuspid auscultation locations. First, classical and deep-learning classifiers are trained independently at each location, and predictions are combined via a maximum-severity late-fusion rule. Second, a synchronous multi-input CNN jointly processes one representative segment per location for a single task. Third, a unified multi-input, multi-output CNN predicts all five attributes from one shared multi-spot representation. Using 735 patients from the CirCor DigiScope dataset with complete four-spot recordings, the best late-fusion configurations reach an unweighted mean sensitivity between 85.56% and 93.81% across the five tasks, with class-specific recalls between 80.00% and 100.00% for every relevant category. The multi-input CNN trails late fusion by 7-16 points depending on the task, while the multi-output model reaches values between 72.59% and 79.40%, estimating all five attributes from one shared representation. We further show that naively balancing training data by adding all minority-class segments degrades patient-level performance under the maximum-severity rule, since it introduces non-representative, noisy segments not filtered by the clustering-based segment selection used for evaluation. These results indicate multi-spot murmur characterization is feasible with both fusion-based and jointly learned architectures, outlining a path toward automatic, structured murmur reports complementing binary screening.

v1.19.0 - Trace Your Workflows, Layer by Layer

Dify 1.19.0 enhances observability with nested workflow tracing, allowing users to follow execution steps inside Workflow Tools, inspect LLM calls, and maintain context across nested invocations. The release also enables portable app packages via App packages, improves Agent file uploads and previews, introduces Skill Hub automation through CLI commands, and upgrades the bundled plugin daemon to version 0.6.14-local. Key changes include support for format v2 app packages, enhanced security, improved editing workflows, and updated environment variables and API endpoints.